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dr. ir. J. (Jeroen) de Ridder

dr. ir. J. (Jeroen) de Ridder

Associate Professor
dr. ir. J. (Jeroen) de Ridder
  • Group De Ridder, section Genetics

Research Programs

Cancer

Research Output (50)

Author Correction:Accurate detection of circulating tumor DNA using nanopore consensus sequencing (npj Genomic Medicine, (2021), 6, 1, (106), 10.1038/s41525-021-00272-y)

Marcozzi Alessio, Jager Myrthe, Elferink Martin, Straver Roy, van Ginkel Joost H, Peltenburg Boris, Chen Li-Ting, Renkens Ivo, van Kuik Joyce, Terhaard Chris, de Bree Remco, Devriese Lot A, Willems Stefan M, Kloosterman Wigard P, de Ridder Jeroen Dec 2023, In: npj Genomic Medicine. 8

WEE1 inhibitor adavosertib in combination with carboplatin in advanced TP53 mutated ovarian cancer:A biomarker-enriched phase II study

Embaby Alaa, Kutzera Joachim, Geenen Jill J, Pluim Dick, Hofland Ingrid, Sanders Joyce, Lopez-Yurda Marta, Beijnen Jos H, Huitema Alwin D R, Witteveen Petronella O, Steeghs Neeltje, van Haaften Gijs, van Vugt Marcel A T M, de Ridder Jeroen, Opdam Frans L 24 May 2023, In: Gynecologic Oncology. 174 , p. 239-246 8 p.

The genome-wide mutational consequences of DNA hypomethylation

Besselink Nicolle, Keijer Janneke, Vermeulen Carlo, Boymans Sander, de Ridder Jeroen, van Hoeck Arne, Cuppen Edwin, Kuijk Ewart 27 Apr 2023, In: Scientific Reports. 13

Multi-country metabolic signature discovery for chicken health classification

Wolthuis Joanna C., Magnúsdóttir Stefanía, Stigter Edwin, Tang Yuen Fung, Jans Judith, Gilbert Myrthe, van der Hee Bart, Langhout Pim, Gerrits Walter, Kies Arie, de Ridder Jeroen, van Mil Saskia 2 Feb 2023, In: Metabolomics. 19

PolarMorphism enables discovery of shared genetic variants across multiple traits from GWAS summary statistics

von Berg Joanna, Ten Dam Michelle, van der Laan Sander W, de Ridder Jeroen 1 Jul 2022, In: Bioinformatics (Oxford, England). 38 , p. i212-i219

Accurate detection of circulating tumor DNA using nanopore consensus sequencing

Marcozzi Alessio, Jager Myrthe, Elferink Martin, Straver Roy, van Ginkel Joost H, Peltenburg Boris, Chen Li-Ting, Renkens Ivo, van Kuik Joyce, Terhaard Chris, de Bree Remco, Devriese Lot A, Willems Stefan M, Kloosterman Wigard P, de Ridder Jeroen 9 Dec 2021, In: npj Genomic Medicine. 6 , p. 1-11

MetaboShiny:interactive analysis and metabolite annotation of mass spectrometry-based metabolomics data

Wolthuis Joanna C, Magnusdottir Stefania, Pras-Raves Mia, Moshiri Maryam, Jans Judith J M, Burgering Boudewijn, van Mil Saskia, de Ridder Jeroen 11 Sep 2020, In: Metabolomics. 16 , p. 99

Alternate approach to stroke phenotyping identifies a genetic risk locus for small vessel stroke

von Berg Joanna, van der Laan Sander W, McArdle Patrick F, Malik Rainer, Kittner Steven J, Mitchell Braxton D, Worrall Bradford B, de Ridder Jeroen, Pulit Sara L 11 Feb 2020, In: European Journal of Human Genetics. 28 , p. 963-972 10 p.

Eleven grand challenges in single-cell data science

Lähnemann David, Köster Johannes, Szczurek Ewa, McCarthy Davis J, Hicks Stephanie C, Robinson Mark D, Vallejos Catalina A, Campbell Kieran R, Beerenwinkel Niko, Mahfouz Ahmed, Pinello Luca, Skums Pavel, Stamatakis Alexandros, Attolini Camille Stephan-Otto, Aparicio Samuel, Baaijens Jasmijn, Balvert Marleen, Barbanson Buys de, Cappuccio Antonio, Corleone Giacomo, Dutilh Bas E, Florescu Maria, Guryev Victor, Holmer Rens, Jahn Katharina, Lobo Thamar Jessurun, Keizer Emma M, Khatri Indu, Kielbasa Szymon M, Korbel Jan O, Kozlov Alexey M, Kuo Tzu-Hao, Lelieveldt Boudewijn P F, Mandoiu Ion I, Marioni John C, Marschall Tobias, Mölder Felix, Niknejad Amir, Raczkowski Lukasz, Reinders Marcel, Ridder Jeroen de, Saliba Antoine-Emmanuel, Somarakis Antonios, Stegle Oliver, Theis Fabian J, Yang Huan, Zelikovsky Alex, McHardy Alice C, Raphael Benjamin J, Shah Sohrab P, 7 Feb 2020, In: Genome Biology. 21 , p. 1-35

A deep learning system accurately classifies primary and metastatic cancers using passenger mutation patterns

Jiao Wei, Atwal Gurnit, Polak Paz, Karlic Rosa, Cuppen Edwin, Danyi Alexandra, de Ridder Jeroen, van Herpen Carla, Lolkema Martijn P, Steeghs Neeltje, Getz Gad, Morris Quaid, Stein Lincoln D, 5 Feb 2020, In: Nature Communications. 11 12 p.

All research output

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