dr. A.C. (Anita) Schürch
Research Staff Other
- Department of Medical Microbiology
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Research Output (12)
gplas:a comprehensive tool for plasmid analysis using short-read graphs
Arredondo-Alonso Sergio, Bootsma Martin, Hein Yaïr, Rogers Malbert R.C., Corander Jukka, Willems Rob J.L., Schürch Anita C. 15 jun 2020, In: Bioinformatics (Oxford, England). 36 , p. 3874-3876 3 p.
Plasmids shaped the recent emergence of the major nosocomial pathogen Enterococcus faecium
Arredondo-Alonso S., Top J., McNally A., Puranen S., Pesonen M., Pensar J., Marttinen P., Braat J. C., Rogers M. R.C., van Schaik W., Kaski S., Willems R. J.L., Corander J., Schürch A. C. 11 feb 2020, In: mBio. 11 17 p.
Extended-spectrum beta-lactamase (ESBL)-producing and non-ESBL-producing Escherichia coli isolates causing bacteremia in the Netherlands (2014 - 2016) differ in clonal distribution, antimicrobial resistance gene and virulence gene content
van Hout Denise, Verschuuren Tess D, Bruijning-Verhagen Patricia C J, Bosch Thijs, Schürch Anita C, Willems Rob J L, Bonten Marc J M, Kluytmans Jan A J W 1 jan 2020, In: PLoS ONE. 15 14 p.
Sequence-Based Epidemiology of an OXA-48 Plasmid during Hospital Outbreak
Hidalgo Laura, de Been Mark, Rogers Malbert R C, Schürch Anita C, Scharringa Jelle, van der Zee Anneke, Bonten Marc J M, Fluit Ad C 7 okt 2019, In: Antimicrobial Agents and Chemotherapy. 63
Prevalence, risk factors and genetic characterisation of extended-spectrum beta-lactamase and carbapenemase-producing Enterobacteriaceae (ESBL-E and CPE): a community-based cross-sectional study, the Netherlands, 2014 to 2016
van den Bunt Gerrita, van Pelt Wilfrid, Hidalgo Laura, Scharringa Jelle, de Greeff Sabine C., Schurch Anita C., Mughini-Gras Lapo, Bonten Marc J. M., Fluit Ad C. 1 okt 2019, In: Eurosurveillance. 24 , p. 29-39 11 p.
Draft Genome Sequence of Haemophilus haemolyticus Strain 16/010 O, Isolated from a Sputum Sample from a Cystic Fibrosis Patient
Fluit Ad C, Bayjanov Jumamurat R, Tunney Michael, Elborn J Stuart, Rogers Malbert R C, Schürch Anita C, Ekkelenkamp Miquel B 6 jun 2019, In: Microbiology resource announcements. 8
datacarpentry/shell-genomics: Data Carpentry: Introduction to the shell for genomics data
Becker Erin Alison, Schürch Anita, Teal Tracy, McKay Sheldon John, Mizzi Jessica Elizabeth, Michonneau François, Hodge Amy E., Joslin Shannon EK, Reiter Taylor, Cranston Karen, Jordan Kari L, Buysscher Tristan De, Jareborg Niclas, NV Tobi, Charbonneau Amanda, Tzovaras Bastian Greshake, Batut Bérénice, Davenport Colin, Das Diya, Riva Giulio Valentino Dalla, Sosa Omar Julio, Hollander Mattias de, Lee Mike, Harris Rayna Michelle, Cunning Ross, Stevens Sarah, Chudalayandi Siva 1 jun 2019,
Corrigendum:Mlplasmids: A user-friendly tool to predict plasmid-and chromosome-derived sequences for single species, (Microbial Genomics), (2018), 4, 10.1099/mgen.0.000224
Arredondo-Alonso Sergio, Rogers Malbert R.C., Braat Johanna C., Verschuuren Tess D., Top Janetta, Corander Jukka, Willems Rob J.L., Schürch Anita C. 1 jan 2019, In: Microbial genomics. 5
mlplasmids:a user-friendly tool to predict plasmid- and chromosome-derived sequences for single species
Arredondo-Alonso Sergio, Rogers Malbert R.C., Braat Johanna C., Verschuuren Tess D., Top Janetta, Corander Jukka, Willems Rob J.L., Schürch Anita C. 1 nov 2018, In: Microbial genomics. 4
Identification of HCV Resistant Variants against Direct Acting Antivirals in Plasma and Liver of Treatment Naïve Patients
Raj V. Stalin, Hundie Gadissa Bedada, Schürch Anita C., Smits Saskia L., Pas Suzan D., Le Pogam Sophie, Janssen Harry L.A., De Knegt Rob J., Osterhaus Albert D.M.E., Najera Isabel, Boucher Charles A., Haagmans Bart L. 1 dec 2017, In: Scientific Reports. 7