dr. A.C. (Anita) Schürch

dr. A.C. (Anita) Schürch

Associate Professor

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Research Output (21)

Mge-cluster:a reference-free approach for typing bacterial plasmids

Arredondo-Alonso Sergio, Gladstone Rebecca A, Pöntinen Anna K, Gama João A, Schürch Anita C, Lanza Val F, Johnsen Pål Jarle, Samuelsen Ørjan, Tonkin-Hill Gerry, Corander Jukka 1 Sep 2023, In: NAR genomics and bioinformatics. 5 15 p.

Characterization of bla<sub>KPC-2</sub> and bla<sub>NDM-1</sub> Plasmids of a K. pneumoniae ST11 Outbreak Clone

Boralli Camila Maria dos Santos, Paganini Julian Andres, Meneses Rodrigo Silva, Mata Camila Pacheco Silveira Martins da, Leite Edna Marilea Meireles, Schürch Anita C., Paganelli Fernanda L., Willems Rob J.L., Camargo Ilana Lopes Baratella Cunha May 2023, In: Antibiotics. 12

A high-throughput multiplexing and selection strategy to complete bacterial genomes

Pöntinen Anna K, Cléon François, Gladstone Rebecca A, Schürch Anita C, Johnsen Pål J, Samuelsen Ørjan, Corander Jukka 9 Dec 2021, In: GigaScience. 10

Recovering escherichia coli plasmids in the absence of long-read sequencing data

Paganini Julian A., Plantinga Nienke L., Arredondo-alonso Sergio, Willems Rob J.L., Schürch Anita C. 28 Jul 2021, In: Microorganisms. 9 , p. 1-20

Apparent nosocomial adaptation of Enterococcus faecalis predates the modern hospital era

Pöntinen Anna K, Top Janetta, Arredondo-Alonso Sergio, Tonkin-Hill Gerry, Freitas Ana R, Novais Carla, Gladstone Rebecca A, Pesonen Maiju, Meneses Rodrigo, Pesonen Henri, Lees John A, Jamrozy Dorota, Bentley Stephen D, Lanza Val F, Torres Carmen, Peixe Luisa, Coque Teresa M, Parkhill Julian, Schürch Anita C, Willems Rob J L, Corander Jukka 9 Mar 2021, In: Nature Communications. 12 13 p.

Mode and dynamics of vanA-type vancomycin resistance dissemination in Dutch hospitals

Arredondo-Alonso Sergio, Top Janetta, Corander Jukka, Willems Rob J L, Schürch Anita C 20 Jan 2021, In: Genome Medicine. 13 , p. 1-18 18 p.

Comparative genomics of ESBL-producing Escherichia coli (ESBL-Ec) reveals a similar distribution of the 10 most prevalent ESBL-Ec clones and ESBL genes among human community faecal and extra-intestinal infection isolates in the Netherlands (2014-17)

Verschuuren T D, van Hout D, Arredondo-Alonso S, Fluit A C, Reuland E A, Top J, Schürch A C, Bosch T, Bonten M J M, Kluytmans J A J W, Willems R J L 11 Jan 2021, In: The Journal of antimicrobial chemotherapy. 76 , p. 901-908 8 p.

gplas:a comprehensive tool for plasmid analysis using short-read graphs

Arredondo-Alonso Sergio, Bootsma Martin, Hein Yaïr, Rogers Malbert R.C., Corander Jukka, Willems Rob J.L., Schürch Anita C. 15 Jun 2020, In: Bioinformatics (Oxford, England). 36 , p. 3874-3876 3 p.

Plasmids shaped the recent emergence of the major nosocomial pathogen Enterococcus faecium

Arredondo-Alonso S., Top J., McNally A., Puranen S., Pesonen M., Pensar J., Marttinen P., Braat J. C., Rogers M. R.C., van Schaik W., Kaski S., Willems R. J.L., Corander J., Schürch A. C. 11 Feb 2020, In: mBio. 11 17 p.

Extended-spectrum beta-lactamase (ESBL)-producing and non-ESBL-producing Escherichia coli isolates causing bacteremia in the Netherlands (2014 - 2016) differ in clonal distribution, antimicrobial resistance gene and virulence gene content

van Hout Denise, Verschuuren Tess D, Bruijning-Verhagen Patricia C J, Bosch Thijs, Schürch Anita C, Willems Rob J L, Bonten Marc J M, Kluytmans Jan A J W 1 Jan 2020, In: PLoS ONE. 15 , p. 1-14 14 p.

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