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prof. dr. ir. A. (Alexander) van Oudenaarden

Full Professor
  • Molecular Cancer Research
  • Hubrecht Institute

Research Programs

Strategic Program Cancer

Research Output (108)

An in vitro model of early anteroposterior organization during human development

Moris Naomi, Anlas Kerim, van den Brink Susanne C, Alemany Anna, Schröder Julia, Ghimire Sabitri, Balayo Tina, van Oudenaarden Alexander, Martinez Arias Alfonso 18 jun 2020, In: Nature. 582 , p. 410-415 6 p.

Publisher Correction:Single-cell and spatial transcriptomics reveal somitogenesis in gastruloids

van den Brink Susanne C, Alemany Anna, van Batenburg Vincent, Moris Naomi, Blotenburg Marloes, Vivié Judith, Baillie-Johnson Peter, Nichols Jennifer, Sonnen Katharina F, Martinez Arias Alfonso, van Oudenaarden Alexander 19 mrt 2020, In: Nature. 579 , p. E11-E11

Sequencing metabolically labeled transcripts in single cells reveals mRNA turnover strategies

Battich Nico, Beumer Joep, de Barbanson Buys, Krenning Lenno, Baron Chloé S, Tanenbaum Marvin E, Clevers Hans, van Oudenaarden Alexander 6 mrt 2020, In: Science. 367 , p. 1151-1156 6 p.

Snake Venom Gland Organoids

Post Yorick, Puschhof Jens, Beumer Joep, Kerkkamp Harald M., de Bakker Merijn A.G., Slagboom Julien, de Barbanson Buys, Wevers Nienke R., Spijkers Xandor M., Olivier Thomas, Kazandjian Taline D., Ainsworth Stuart, Iglesias Carmen Lopez, van de Wetering Willine J., Heinz Maria C., van Ineveld Ravian L., van Kleef Regina G.D.M., Begthel Harry, Korving Jeroen, Bar-Ephraim Yotam E., Getreuer Walter, Rios Anne C., Westerink Remco H.S., Snippert Hugo J.G., van Oudenaarden Alexander, Peters Peter J., Vonk Freek J., Kool Jeroen, Richardson Michael K., Casewell Nicholas R., Clevers Hans 23 jan 2020, In: Cell. 180 , p. 233-247.e21

Single-cell and spatial transcriptomics reveal somitogenesis in gastruloids

van den Brink Susanne C., Alemany Anna, van Batenburg Vincent, Moris Naomi, Blotenburg Marloes, Vivié Judith, Baillie-Johnson Peter, Nichols Jennifer, Sonnen Katharina F., Martinez Arias Alfonso, van Oudenaarden Alexander 1 jan 2020, In: Nature. 582 , p. 405-409

LifeTime and improving European healthcare through cell-based interceptive medicine

Rajewsky Nikolaus, Almouzni Geneviève, Gorski Stanislaw A., Aerts Stein, Amit Ido, Bertero Michela G., Bock Christoph, Bredenoord Annelien L., Cavalli Giacomo, Chiocca Susanna, Clevers Hans, De Strooper Bart, Eggert Angelika, Ellenberg Jan, Fernández Xosé M., Figlerowicz Marek, Gasser Susan M., Hubner Norbert, Kjems Jørgen, Knoblich Jürgen A., Krabbe Grietje, Lichter Peter, Linnarsson Sten, Marine Jean Christophe, Marioni John, Marti-Renom Marc A., Netea Mihai G., Nickel Dörthe, Nollmann Marcelo, Novak Halina R., Parkinson Helen, Piccolo Stefano, Pinheiro Inês, Pombo Ana, Popp Christian, Reik Wolf, Roman-Roman Sergio, Rosenstiel Philip, Schultze Joachim L., Stegle Oliver, Tanay Amos, Testa Giuseppe, Thanos Dimitris, Theis Fabian J., Torres-Padilla Maria Elena, van Oudenaarden Alexander, Bruining Hilgo, Jongsma Karin R., Pasterkamp R. Jeroen, van Oudenaarden Alexander, 2020, In: Nature. 587 , p. 377-386 10 p.

Enteroendocrine and tuft cells support Lgr5 stem cells on Paneth cell depletion

Van Es Johan H., Wiebrands Kay, López-Iglesias Carmen, Van De Wetering Marc, Zeinstra Laura, Van Den Born Maaike, Korving Jeroen, Sasaki Nobuo, Peters Peter J., Van Oudenaarden Alexander, Clevers Hans 26 dec 2019, In: Proceedings of the National Academy of Sciences of the United States of America. 116 , p. 26599-26605 7 p.

Single-cell analysis uncovers that metabolic reprogramming by ErbB2 signaling is essential for cardiomyocyte proliferation in the regenerating heart

Honkoop Hessel, de Bakker Dennis Em, Aharonov Alla, Kruse Fabian, Shakked Avraham, Nguyen Phong D, de Heus Cecilia, Garric Laurence, Muraro Mauro J, Shoffner Adam, Tessadori Federico, Peterson Joshua Craiger, Noort Wendy, Bertozzi Alberto, Weidinger Gilbert, Posthuma George, Grun Dominic, van der Laarse Willem J, Klumperman Judith, Jaspers Richard T, Poss Kenneth D, van Oudenaarden Alexander, Tzahor Eldad, Bakkers Jeroen 23 dec 2019, In: eLife. 8

Unravelling cellular relationships during development and regeneration using genetic lineage tracing

Baron Chloé S., van Oudenaarden Alexander 1 dec 2019, In: Nature reviews molecular cell biology. 20 , p. 753-765 13 p.

Cell Type Purification by Single-Cell Transcriptome-Trained Sorting

Baron Chloé S., Barve Aditya, Muraro Mauro J., van der Linden Reinier, Dharmadhikari Gitanjali, Lyubimova Anna, de Koning Eelco J.P., van Oudenaarden Alexander 3 okt 2019, In: Cell. 179 , p. 527-542.e19

All research output

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